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NDI-matlab
NDI-matlab
- Home
- Installation
- Tutorials
  Tutorials
  - 1 The NDI model
    1 The NDI model
    
    1.1 Introduction
    
    1.2 Real world vocabulary
  - 2 Analzying your first electrophysiology experiment with NDI
    2 Analzying your first electrophysiology experiment with NDI
    
    2.1 Reading an example dataset
    
    2.2 Automating data reading with NDI
    
    2.3 Using apps to analyze data (example - spike sorting)
    
    2.4 Analyzing spiking responses and tuning curve properties
    
    2.5 Searching NDI databases
  - 3 Tutorials for new coders or new Matlab users
    3 Tutorials for new coders or new Matlab users
    
    3.1 Newbie version of your first electrophysiology experiment with NDI
  - 4 Datasets
    4 Datasets
    
    Francesconi_et_al_2025
  - 7 Writing your own apps and calculators
    7 Writing your own apps and calculators
    
    7.2 Writing short calculations
  - Planned
    Planned
    
    4. Case studies in reading data in NDI
    
    5. Making your own data pipeline in NDI
    
    6. Making your own analysis app that uses NDI
    
    7. Submitting your data to an archive
    
    8. Search and analyze NDI databases on the web
- Manual (in progress)
  Manual (in progress)
  - User manual
    User manual
    
    Queries
  - Developer Manual
    Developer Manual
    
    Cloud
    
    Calculators
    
    Documents
- Document reference
  Document reference
  - animalsubject
  - app
  - base
  - dataset_remote
  - dataset_session_info
  - demoNDI
  - element
  - element_epoch
  - epochclocktimes
  - epochid
  - measurement
  - mock
  - oneepoch
  - projectvar
  - session
  - session_in_a_dataset
  - subject
  - subject_group
  - subjectmeasurement
  - treatment
  - apps
    apps
    
    calculators
    calculators
    
    simple_calc
    
    tuningcurve_calc
    
    jrclust
    jrclust
    
    jrclust_clusters
    
    markgarbage
    markgarbage
    
    valid_interval
    
    spikeextractor
    spikeextractor
    
    spike_extraction_parameters
    
    spike_extraction_parameters_modification
    
    spikewaves
    
    spikesorter
    spikesorter
    
    sorting_parameters
    
    spike_clusters
    
    vhlab_voltage2firingrate
    vhlab_voltage2firingrate
    
    binnedspikeratevm
    
    vmneuralresponseresiduals
    
    vmspikefilteringparameters
    
    vmspikefit
    
    vmspikesummary
  - daq
    daq
    
    daqmetadatareader
    
    daqreader
    
    daqreader_ndr
    
    daqsystem
    
    filenavigator
    
    syncgraph
    
    syncrule
  - data
    data
    
    binaryseries_parameters
    
    fitcurve
    
    generic_file
    
    image
    
    imageCollection
    
    imageStack
    
    imageStack_parameters
    
    ngrid
    
    ontologyImage
    
    ontologyLabel
    
    ontologyTableRow
  - element
    element
    
    distance_metadata
    
    position_metadata
  - ingestion
    ingestion
    
    daqmetadatareader_epochdata_ingested
    
    daqreader_epochdata_ingested
    
    daqreader_mfdaq_epochdata_ingested
    
    epochfiles_ingested
    
    metadata_editor
    
    syncrule_mapping
  - metadata
    metadata
    
    openminds
    
    openminds_element
    
    openminds_stimulus
    
    openminds_subject
  - mock
    mock
    
    demoNDIMock
  - neuron
    neuron
    
    neuron_extracellular
  - probe
    probe
    
    electrode_offset_voltage
    
    probe_geometry
    
    probe_location
    
    site2channelmap
  - sorting
    sorting
    
    SpikeInterfaceSortingOutputs
  - stimulus
    stimulus
    
    control_stimulus_ids
    
    stimulus_bath
    
    stimulus_parameter
    
    stimulus_parameter_table
    
    stimulus_presentation
    
    stimulus_response
    
    stimulus_response_scalar
    
    stimulus_response_scalar_parameters
    
    stimulus_response_scalar_parameters_basic
    
    stimulus_tuningcurve
    
    vision
    vision
    
    oridir
    oridir
    
    orientation_direction_tuning
  - treatment
    treatment
    
    treatment_drug
    
    virus_injection
- Code reference
  Code reference
  - Contents
  - ndi_toolbox_setup
  - ndi PACKAGE
    ndi PACKAGE
    
    ndi.app
    
    ndi.cache
    
    ndi.calculator
    
    ndi.cpipeline
    
    ndi.database
    
    ndi.dataset
    
    ndi.document
    
    ndi.documentservice
    
    ndi.element
    
    ndi.epoch
    
    ndi.filesep
    
    ndi.ido
    
    ndi.neuron
    
    ndi.ontology
    
    ndi.probe
    
    ndi.query
    
    ndi.session
    
    ndi.subject
    
    ndi.toolboxdir
    
    ndi.validate
    
    ndi.version
    
    app PACKAGE
    app PACKAGE
    
    ndi.app.appdoc
    
    ndi.app.markgarbage
    
    ndi.app.oridirtuning
    
    ndi.app.spikeextractor
    
    ndi.app.spikesorter
    
    stimulus PACKAGE
    stimulus PACKAGE
    
    ndi.app.stimulus.decoder
    
    ndi.app.stimulus.tuning_response
    
    calc PACKAGE
    calc PACKAGE
    
    ndi.calc.tuning_fit
    
    example PACKAGE
    example PACKAGE
    
    ndi.calc.example.simple
    
    stimulus PACKAGE
    stimulus PACKAGE
    
    ndi.calc.stimulus.tuningcurve
    
    cloud PACKAGE
    cloud PACKAGE
    
    ndi.cloud.authenticate
    
    ndi.cloud.authenticateOriginal
    
    ndi.cloud.downloadDataset
    
    ndi.cloud.logout
    
    ndi.cloud.syncDataset
    
    ndi.cloud.uilogin
    
    ndi.cloud.uploadDataset
    
    ndi.cloud.uploadSingleFile
    
    admin PACKAGE
    admin PACKAGE
    
    ndi.cloud.admin.checkSubmission
    
    ndi.cloud.admin.createNewDOI
    
    ndi.cloud.admin.registerDatasetDOI
    
    crossref PACKAGE
    crossref PACKAGE
    
    ndi.cloud.admin.crossref.Constants
    
    ndi.cloud.admin.crossref.convertCloudDatasetToCrossrefDataset
    
    ndi.cloud.admin.crossref.createDatabaseMetadata
    
    ndi.cloud.admin.crossref.createDoiBatchHeadElement
    
    ndi.cloud.admin.crossref.createDoiBatchSubmission
    
    conversion PACKAGE
    conversion PACKAGE
    
    ndi.cloud.admin.crossref.conversion.convertContributors
    
    ndi.cloud.admin.crossref.conversion.convertDatasetDate
    
    ndi.cloud.admin.crossref.conversion.convertFunding
    
    ndi.cloud.admin.crossref.conversion.convertLicense
    
    ndi.cloud.admin.crossref.conversion.convertRelatedPublications
    
    api PACKAGE
    api PACKAGE
    
    ndi.cloud.api.call
    
    ndi.cloud.api.url
    
    auth PACKAGE
    auth PACKAGE
    
    ndi.cloud.api.auth.changePassword
    
    ndi.cloud.api.auth.login
    
    ndi.cloud.api.auth.loginOriginal
    
    ndi.cloud.api.auth.logout
    
    ndi.cloud.api.auth.logoutOriginal
    
    ndi.cloud.api.auth.resendConfirmation
    
    ndi.cloud.api.auth.resetPassword
    
    ndi.cloud.api.auth.verifyUser
    
    compute PACKAGE
    compute PACKAGE
    
    ndi.cloud.api.compute.abortSession
    
    ndi.cloud.api.compute.finalizeSession
    
    ndi.cloud.api.compute.getSessionStatus
    
    ndi.cloud.api.compute.listSessions
    
    ndi.cloud.api.compute.startSession
    
    ndi.cloud.api.compute.triggerStage
    
    datasets PACKAGE
    datasets PACKAGE
    
    ndi.cloud.api.datasets.createDataset
    
    ndi.cloud.api.datasets.createDatasetBranch
    
    ndi.cloud.api.datasets.deleteDataset
    
    ndi.cloud.api.datasets.getBranches
    
    ndi.cloud.api.datasets.getDataset
    
    ndi.cloud.api.datasets.getPublished
    
    ndi.cloud.api.datasets.getUnpublished
    
    ndi.cloud.api.datasets.listDatasets
    
    ndi.cloud.api.datasets.listDeletedDatasets
    
    ndi.cloud.api.datasets.publishDataset
    
    ndi.cloud.api.datasets.submitDataset
    
    ndi.cloud.api.datasets.undeleteDataset
    
    ndi.cloud.api.datasets.unpublishDataset
    
    ndi.cloud.api.datasets.updateDataset
    
    documents PACKAGE
    documents PACKAGE
    
    ndi.cloud.api.documents.addDocument
    
    ndi.cloud.api.documents.addDocumentAsFile
    
    ndi.cloud.api.documents.bulkDeleteDocuments
    
    ndi.cloud.api.documents.countDocuments
    
    ndi.cloud.api.documents.deleteDocument
    
    ndi.cloud.api.documents.documentCount
    
    ndi.cloud.api.documents.getBulkDownloadURL
    
    ndi.cloud.api.documents.getBulkUploadURL
    
    ndi.cloud.api.documents.getDocument
    
    ndi.cloud.api.documents.listDatasetDocuments
    
    ndi.cloud.api.documents.listDatasetDocumentsAll
    
    ndi.cloud.api.documents.listDeletedDocuments
    
    ndi.cloud.api.documents.ndiquery
    
    ndi.cloud.api.documents.ndiqueryAll
    
    ndi.cloud.api.documents.updateDocument
    
    files PACKAGE
    files PACKAGE
    
    ndi.cloud.api.files.getFile
    
    ndi.cloud.api.files.getFileCollectionUploadURL
    
    ndi.cloud.api.files.getFileDetails
    
    ndi.cloud.api.files.getFileUploadURL
    
    ndi.cloud.api.files.listFiles
    
    ndi.cloud.api.files.putFiles
    
    implementation PACKAGE
    implementation PACKAGE
    
    auth PACKAGE
    auth PACKAGE
    
    ndi.cloud.api.implementation.auth.ChangePassword
    
    ndi.cloud.api.implementation.auth.Login
    
    ndi.cloud.api.implementation.auth.Logout
    
    ndi.cloud.api.implementation.auth.ResendConfirmation
    
    ndi.cloud.api.implementation.auth.ResetPassword
    
    ndi.cloud.api.implementation.auth.VerifyUser
    
    compute PACKAGE
    compute PACKAGE
    
    ndi.cloud.api.implementation.compute.AbortSession
    
    ndi.cloud.api.implementation.compute.FinalizeSession
    
    ndi.cloud.api.implementation.compute.GetSessionStatus
    
    ndi.cloud.api.implementation.compute.ListSessions
    
    ndi.cloud.api.implementation.compute.StartSession
    
    ndi.cloud.api.implementation.compute.TriggerStage
    
    datasets PACKAGE
    datasets PACKAGE
    
    ndi.cloud.api.implementation.datasets.CreateDataset
    
    ndi.cloud.api.implementation.datasets.CreateDatasetBranch
    
    ndi.cloud.api.implementation.datasets.DeleteDataset
    
    ndi.cloud.api.implementation.datasets.GetBranches
    
    ndi.cloud.api.implementation.datasets.GetDataset
    
    ndi.cloud.api.implementation.datasets.GetPublished
    
    ndi.cloud.api.implementation.datasets.GetUnpublished
    
    ndi.cloud.api.implementation.datasets.ListDatasets
    
    ndi.cloud.api.implementation.datasets.ListDeletedDatasets
    
    ndi.cloud.api.implementation.datasets.PublishDataset
    
    ndi.cloud.api.implementation.datasets.SubmitDataset
    
    ndi.cloud.api.implementation.datasets.UndeleteDataset
    
    ndi.cloud.api.implementation.datasets.UnpublishDataset
    
    ndi.cloud.api.implementation.datasets.UpdateDataset
    
    documents PACKAGE
    documents PACKAGE
    
    ndi.cloud.api.implementation.documents.AddDocument
    
    ndi.cloud.api.implementation.documents.AddDocumentAsFile
    
    ndi.cloud.api.implementation.documents.BulkDeleteDocuments
    
    ndi.cloud.api.implementation.documents.CountDocuments
    
    ndi.cloud.api.implementation.documents.DeleteDocument
    
    ndi.cloud.api.implementation.documents.DocumentCount
    
    ndi.cloud.api.implementation.documents.GetBulkDownloadURL
    
    ndi.cloud.api.implementation.documents.GetBulkUploadURL
    
    ndi.cloud.api.implementation.documents.GetDocument
    
    ndi.cloud.api.implementation.documents.ListDatasetDocuments
    
    ndi.cloud.api.implementation.documents.ListDatasetDocumentsAll
    
    ndi.cloud.api.implementation.documents.ListDeletedDocuments
    
    ndi.cloud.api.implementation.documents.NdiQuery
    
    ndi.cloud.api.implementation.documents.NdiQueryAll
    
    ndi.cloud.api.implementation.documents.UpdateDocument
    
    files PACKAGE
    files PACKAGE
    
    ndi.cloud.api.implementation.files.GetFile
    
    ndi.cloud.api.implementation.files.GetFileCollectionUploadURL
    
    ndi.cloud.api.implementation.files.GetFileDetails
    
    ndi.cloud.api.implementation.files.GetFileUploadURL
    
    ndi.cloud.api.implementation.files.ListFiles
    
    ndi.cloud.api.implementation.files.PutFiles
    
    users PACKAGE
    users PACKAGE
    
    ndi.cloud.api.implementation.users.CreateUser
    
    ndi.cloud.api.implementation.users.GetUser
    
    ndi.cloud.api.implementation.users.Me
    
    users PACKAGE
    users PACKAGE
    
    ndi.cloud.api.users.GetUser
    
    ndi.cloud.api.users.createUser
    
    ndi.cloud.api.users.me
    
    download PACKAGE
    download PACKAGE
    
    ndi.cloud.download.dataset
    
    ndi.cloud.download.datasetDocuments
    
    ndi.cloud.download.downloadDatasetFiles
    
    ndi.cloud.download.downloadDocumentCollection
    
    ndi.cloud.download.downloadGenericFiles
    
    ndi.cloud.download.jsons2documents
    
    sync PACKAGE
    sync PACKAGE
    
    ndi.cloud.sync.SyncOptions
    
    ndi.cloud.sync.downloadNew
    
    ndi.cloud.sync.mirrorFromRemote
    
    ndi.cloud.sync.mirrorToRemote
    
    ndi.cloud.sync.twoWaySync
    
    ndi.cloud.sync.uploadNew
    
    ndi.cloud.sync.validate
    
    enum PACKAGE
    enum PACKAGE
    
    ndi.cloud.sync.enum.SyncMode
    
    ui PACKAGE
    ui PACKAGE
    
    dialog PACKAGE
    dialog PACKAGE
    
    ndi.cloud.ui.dialog.selectCloudDataset
    
    upload PACKAGE
    upload PACKAGE
    
    ndi.cloud.upload.newDataset
    
    ndi.cloud.upload.scanForUpload
    
    ndi.cloud.upload.uploadDocumentCollection
    
    ndi.cloud.upload.uploadToNDICloud
    
    ndi.cloud.upload.zipForUpload
    
    for_deletion FOLDER
    for_deletion FOLDER
    
    ndi.cloud.upload/for_deletion.update_cloud_metadata
    
    ndi.cloud.upload/for_deletion.update_cloud_metadata_struct
    
    utility PACKAGE
    utility PACKAGE
    
    ndi.cloud.utility.createCloudMetadataStruct
    
    ndi.cloud.utility.mustBeValidMetadata
    
    common PACKAGE
    common PACKAGE
    
    ndi.common.PathConstants
    
    ndi.common.assertDIDInstalled
    
    ndi.common.getCache
    
    ndi.common.getDatabaseHierarchy
    
    ndi.common.getLogger
    
    daq PACKAGE
    daq PACKAGE
    
    ndi.daq.daqsystemstring
    
    ndi.daq.metadatareader
    
    ndi.daq.reader
    
    ndi.daq.system
    
    metadatareader PACKAGE
    metadatareader PACKAGE
    
    ndi.daq.metadatareader.NewStimStims
    
    ndi.daq.metadatareader.NielsenLabStims
    
    ndi.daq.metadatareader.VHAudreyBPod
    
    reader PACKAGE
    reader PACKAGE
    
    ndi.daq.reader.mfdaq
    
    mfdaq PACKAGE
    mfdaq PACKAGE
    
    ndi.daq.reader.mfdaq.blackrock
    
    ndi.daq.reader.mfdaq.cedspike2
    
    ndi.daq.reader.mfdaq.intan
    
    ndi.daq.reader.mfdaq.ndr
    
    ndi.daq.reader.mfdaq.spikegadgets
    
    system PACKAGE
    system PACKAGE
    
    ndi.daq.system.mfdaq
    
    premature FOLDER
    premature FOLDER
    
    ndi.daq/premature.ndi_daqsystem_image
    
    ndi.daq/premature.ndi_daqsystem_image_tiffstack
    
    ndi.daq/premature.ndi_image
    
    ndi.daq/premature.ndi_image_tiffstack
    
    data PACKAGE
    data PACKAGE
    
    ndi.data.evaluate_fitcurve
    
    database PACKAGE
    database PACKAGE
    
    ndi.database.binarydoc
    
    ndi.database.ingestion_help
    
    app PACKAGE
    app PACKAGE
    
    dataset_viewer PACKAGE
    dataset_viewer PACKAGE
    
    utility PACKAGE
    utility PACKAGE
    
    ndi.database.app.dataset_viewer.utility.listLocalDatasets
    
    ndi.database.app.dataset_viewer.utility.listRemoteDatasets
    
    doctools PACKAGE
    doctools PACKAGE
    
    ndi.database.doctools.docComparison
    
    fun PACKAGE
    fun PACKAGE
    
    ndi.database.fun.copy_session_to_dataset
    
    ndi.database.fun.copydocfile2temp
    
    ndi.database.fun.createGenBankControlledVocabulary
    
    ndi.database.fun.createNIFbrainareas
    
    ndi.database.fun.create_new_database
    
    ndi.database.fun.database2json
    
    ndi.database.fun.databasehierarchyinit
    
    ndi.database.fun.dataset_metadata
    
    ndi.database.fun.docs2graph
    
    ndi.database.fun.docs_from_ids
    
    ndi.database.fun.extract_docs_files
    
    ndi.database.fun.find_ingested_docs
    
    ndi.database.fun.findallantecedents
    
    ndi.database.fun.findalldependencies
    
    ndi.database.fun.finddocs_elementEpochType
    
    ndi.database.fun.finddocs_missing_dependencies
    
    ndi.database.fun.lookup_uberon_term
    
    ndi.database.fun.ndi_document2ndi_object
    
    ndi.database.fun.ndicloud_ontology_lookup
    
    ndi.database.fun.openMINDSobj2ndi_document
    
    ndi.database.fun.openMINDSobj2struct
    
    ndi.database.fun.opendatabase
    
    ndi.database.fun.plotinteractivedocgraph
    
    ndi.database.fun.projectvardef
    
    ndi.database.fun.queryNCIm
    
    ndi.database.fun.readGenBankNames
    
    ndi.database.fun.readGenBankNodes
    
    ndi.database.fun.read_presentation_time_structure
    
    ndi.database.fun.readtablechar
    
    ndi.database.fun.uberon_ontology_lookup
    
    ndi.database.fun.write_presentation_time_structure
    
    ndi.database.fun.writetablechar
    
    implementations PACKAGE
    implementations PACKAGE
    
    binarydoc PACKAGE
    binarydoc PACKAGE
    
    ndi.database.implementations.binarydoc.matfid
    
    database PACKAGE
    database PACKAGE
    
    ndi.database.implementations.database.didsqlite
    
    ndi.database.implementations.database.matlabdumbjsondb
    
    ndi.database.implementations.database.matlabdumbjsondb2
    
    fun PACKAGE
    fun PACKAGE
    
    ndi.database.implementations.fun.doc2ingesteddbfilename
    
    ndi.database.implementations.fun.expell
    
    ndi.database.implementations.fun.expell_plan
    
    ndi.database.implementations.fun.ingest
    
    ndi.database.implementations.fun.ingest_plan
    
    metadata PACKAGE
    metadata PACKAGE
    
    ndi.database.metadata.table2treatment
    
    metadata_app PACKAGE
    metadata_app PACKAGE
    
    checker PACKAGE
    checker PACKAGE
    
    ndi.database.metadata_app.checker.subject
    
    class PACKAGE
    class PACKAGE
    
    ndi.database.metadata_app.class.Affiliation
    
    ndi.database.metadata_app.class.AffiliationData
    
    ndi.database.metadata_app.class.AuthorData
    
    ndi.database.metadata_app.class.DatasetData
    
    ndi.database.metadata_app.class.DatasetVersionData
    
    ndi.database.metadata_app.class.DeviceType
    
    ndi.database.metadata_app.class.Electrode
    
    ndi.database.metadata_app.class.ElectrodeArray
    
    ndi.database.metadata_app.class.License
    
    ndi.database.metadata_app.class.MiscellaneousProbe
    
    ndi.database.metadata_app.class.Organization
    
    ndi.database.metadata_app.class.Pipette
    
    ndi.database.metadata_app.class.Probe
    
    ndi.database.metadata_app.class.ProbeData
    
    ndi.database.metadata_app.class.Species
    
    ndi.database.metadata_app.class.SpeciesData
    
    ndi.database.metadata_app.class.Strain
    
    ndi.database.metadata_app.class.Subject
    
    ndi.database.metadata_app.class.SubjectData
    
    ndi.database.metadata_app.class.test
    
    fun PACKAGE
    fun PACKAGE
    
    ndi.database.metadata_app.fun.SearchSpecies
    
    ndi.database.metadata_app.fun.checkValidRORID
    
    ndi.database.metadata_app.fun.expandDropDownItems
    
    ndi.database.metadata_app.fun.generateShortName
    
    ndi.database.metadata_app.fun.getCCByLicences
    
    ndi.database.metadata_app.fun.getOpenMindsInstances
    
    ndi.database.metadata_app.fun.getOpenmindsInstanceFile
    
    ndi.database.metadata_app.fun.getOrcId
    
    ndi.database.metadata_app.fun.getOrcIdSearchUrl
    
    ndi.database.metadata_app.fun.getPublicationTitleFromDoi
    
    ndi.database.metadata_app.fun.getPubmedIdFromDoi
    
    ndi.database.metadata_app.fun.getRequiredFields
    
    ndi.database.metadata_app.fun.getRorId
    
    ndi.database.metadata_app.fun.getRorIdSearchUrl
    
    ndi.database.metadata_app.fun.getSpeciesInfo
    
    ndi.database.metadata_app.fun.loadExperimentalApproach
    
    ndi.database.metadata_app.fun.loadInstancesToListBox
    
    ndi.database.metadata_app.fun.loadInstancesToTreeCheckbox
    
    ndi.database.metadata_app.fun.loadOpenMindsInstanceCatalog
    
    ndi.database.metadata_app.fun.loadProbes
    
    ndi.database.metadata_app.fun.loadSubjects
    
    ndi.database.metadata_app.fun.loadTechniquesEmployed
    
    ndi.database.metadata_app.fun.loadUnits
    
    ndi.database.metadata_app.fun.loadUserInstanceCatalog
    
    ndi.database.metadata_app.fun.loadUserInstances
    
    ndi.database.metadata_app.fun.mustBeValidDate
    
    ndi.database.metadata_app.fun.parseOpenMINDSAtID
    
    ndi.database.metadata_app.fun.readExistingMetadata
    
    ndi.database.metadata_app.fun.resolveRelatedPublication
    
    ndi.database.metadata_app.fun.saveUserInstances
    
    ndi.database.metadata_app.fun.save_dataset_docs
    
    ndi.database.metadata_app.fun.submit_dataset
    
    metadata_ds_core PACKAGE
    metadata_ds_core PACKAGE
    
    ndi.database.metadata_ds_core.Contents
    
    ndi.database.metadata_ds_core.check_metadata_cloud_inputs
    
    ndi.database.metadata_ds_core.check_metadata_inputs
    
    ndi.database.metadata_ds_core.convertDatasetInfoToDocument
    
    ndi.database.metadata_ds_core.convertDocumentToDatasetInfo
    
    ndi.database.metadata_ds_core.convertFormDataToDocuments
    
    ndi.database.metadata_ds_core.load_author_from_ndidocument
    
    ndi.database.metadata_ds_core.metadata_to_json
    
    ndi.database.metadata_ds_core.ndidataset2metadataeditorstruct
    
    ndi.database.metadata_ds_core.saveEditor2Doc
    
    dataset PACKAGE
    dataset PACKAGE
    
    ndi.dataset.dir
    
    docs PACKAGE
    docs PACKAGE
    
    ndi.docs.all_documents2markdown
    
    ndi.docs.build
    
    ndi.docs.calcbuild
    
    ndi.docs.concatenateFiles
    
    ndi.docs.docfun
    
    ndi.docs.document2markdown
    
    ndi.docs.schemastructure2docstructure
    
    element PACKAGE
    element PACKAGE
    
    ndi.element.downsample
    
    ndi.element.missingepochs
    
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ndi.probe.fun.initProbeTypeMap

ndi.probe.fun.initProbeTypeMap is a function.
    probeTypeMap = ndi.probe.fun.initProbeTypeMap(legacy)

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