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vlt_Init
vlt PACKAGE
vlt PACKAGE
vlt.globals
app PACKAGE
app PACKAGE
vlt.app.log
batch PACKAGE
batch PACKAGE
vlt.batch.simple_batch
colorspace PACKAGE
colorspace PACKAGE
vlt.colorspace.angle2ybgr
vlt.colorspace.angle2ycgr
vlt.colorspace.cmyk2rgb
vlt.colorspace.rgb2cmyk
config PACKAGE
config PACKAGE
vlt.config.add_config_file
vlt.config.config_dirname
daq PACKAGE
daq PACKAGE
MCCUSB1208FS PACKAGE
MCCUSB1208FS PACKAGE
vlt.daq.MCCUSB1208FS.MCCUSB1208FS_AcquireSimpleDaq
vlt.daq.MCCUSB1208FS.MCCUSB1208FS_CloseSimpleDaq
vlt.daq.MCCUSB1208FS.MCCUSB1208FS_OpenSimpleDaq
dummyekgeegdaq PACKAGE
dummyekgeegdaq PACKAGE
vlt.daq.dummyekgeegdaq.dummyekgeegdaq_AcquireSimpleDaq
vlt.daq.dummyekgeegdaq.dummyekgeegdaq_CloseSimpleDaq
vlt.daq.dummyekgeegdaq.dummyekgeegdaq_OpenSimpleDaq
simpledaq PACKAGE
simpledaq PACKAGE
vlt.daq.simpledaq.AcquireSimpleDaq
vlt.daq.simpledaq.CloseSimpleDaq
vlt.daq.simpledaq.NewSimpleDaq
vlt.daq.simpledaq.OpenSimpleDaq
data PACKAGE
data PACKAGE
vlt.data.assign
vlt.data.cache
vlt.data.catCellStr
vlt.data.catstructfields
vlt.data.cell2group
vlt.data.cell2matn
vlt.data.cell2mlstr
vlt.data.cell2str
vlt.data.cellarray2mat
vlt.data.celloritem
vlt.data.celltable2struct
vlt.data.columnize_struct
vlt.data.colvec
vlt.data.conditional
vlt.data.conditiongroup2cell
vlt.data.deleteallchildren
vlt.data.dropnan
vlt.data.dropzero
vlt.data.emptystruct
vlt.data.eqemp
vlt.data.eqlen
vlt.data.eqtot
vlt.data.equnique
vlt.data.fieldsearch
vlt.data.findclosest
vlt.data.findclosestpoint
vlt.data.findrowvec
vlt.data.hasAllFields
vlt.data.hashmatlabvariable
vlt.data.isboolean
vlt.data.isempty_cell
vlt.data.isfullfield
vlt.data.isint
vlt.data.islikevarname
vlt.data.ispos
vlt.data.isunix_sv
vlt.data.jsonencodenan
vlt.data.listofvars
vlt.data.matrow2cell
vlt.data.mlstr2var
vlt.data.namevaluepair
vlt.data.nanstderr
vlt.data.numornan
vlt.data.onoff
vlt.data.prettyjson
vlt.data.rowvec
vlt.data.savevar
vlt.data.simpletable
vlt.data.sizeeq
vlt.data.sortorder
vlt.data.sortstruct
vlt.data.str2nume
vlt.data.streq
vlt.data.string2cell
vlt.data.struct2mlstr
vlt.data.struct2namevaluepair
vlt.data.struct2str
vlt.data.struct2tabstr
vlt.data.struct2var
vlt.data.structdiff
vlt.data.structfindfield
vlt.data.structfullfields
vlt.data.structmerge
vlt.data.structpartialmatch
vlt.data.structwhatvaries
vlt.data.tabstr2struct
vlt.data.text2struct
vlt.data.uniq
vlt.data.valid_varname
vlt.data.var2struct
vlt.data.workspace2struct
db PACKAGE
db PACKAGE
vlt.db.struct_name_value_search
docs PACKAGE
docs PACKAGE
vlt.docs.build
vlt.docs.class2help
vlt.docs.markdownoutput2objectstruct
vlt.docs.matlab2markdown
vlt.docs.mkdocsnavtext
vlt.docs.relative_url4object
file PACKAGE
file PACKAGE
vlt.file.addline
vlt.file.arefilessame
vlt.file.cellstr2text
vlt.file.checkout_lock_file
vlt.file.combinepdf
vlt.file.createpath
vlt.file.dirlist_trimdots
vlt.file.dirstrip
vlt.file.drivepath
vlt.file.dumbjsondb
vlt.file.filebackup
vlt.file.filediff
vlt.file.fileid_value
vlt.file.filename_value
vlt.file.filenamesearchreplace
vlt.file.fileobj
vlt.file.filesepconversion
vlt.file.findfilegroups
vlt.file.findfiletype
vlt.file.fixpath
vlt.file.fixtilde
vlt.file.fullfilename
vlt.file.getAllFiles
vlt.file.isfile
vlt.file.isfilepathroot
vlt.file.isfolder
vlt.file.isurl
vlt.file.linpath2mac
vlt.file.load2celllist
vlt.file.loadIgor
vlt.file.loadStructArray
vlt.file.read_tab_delimited_file
vlt.file.readlabviewarray
vlt.file.readplainmat
vlt.file.relativeFilename
vlt.file.release_lock_file
vlt.file.rename_mfiles_functions
vlt.file.saveStructArray
vlt.file.saveasv73
vlt.file.searchreplacefiles_shell
vlt.file.str2text
vlt.file.string2filestring
vlt.file.text2cellnum
vlt.file.text2cellstr
vlt.file.textfile2char
vlt.file.tidypathstring
vlt.file.touch
vlt.file.vcard2mat
vlt.file.writelabviewarray
vlt.file.writeplainmat
custom_file_formats PACKAGE
custom_file_formats PACKAGE
vlt.file.custom_file_formats.addroirawdatafile
vlt.file.custom_file_formats.addvhlspikewaveformfile
vlt.file.custom_file_formats.convertvhlvdatafile2integer
vlt.file.custom_file_formats.newroirawdatafile
vlt.file.custom_file_formats.newvhlspikewaveformfile
vlt.file.custom_file_formats.readcellvoyagertiffheader
vlt.file.custom_file_formats.readroirawdatafile
vlt.file.custom_file_formats.readvhlspikewaveformfile
vlt.file.custom_file_formats.readvhlvdatafile
vlt.file.custom_file_formats.readvhlvdatafile_orig
vlt.file.custom_file_formats.readvhlvheaderfile
vlt.file.custom_file_formats.vhsb_read
vlt.file.custom_file_formats.vhsb_readheader
vlt.file.custom_file_formats.vhsb_sampletype2matlabfwritestring
vlt.file.custom_file_formats.vhsb_write
vlt.file.custom_file_formats.vhsb_writeheader
vlt.file.custom_file_formats.writevhlvdatafile
vlt.file.custom_file_formats.writevhlvheaderfile
vlt.file.custom_file_formats.writevhlvtestfile
xml PACKAGE
xml PACKAGE
vlt.file.xml.getXMLNodeText
vlt.file.xml.parseXML
vlt.file.xml.xml2struct_vhtools
vlt.file.xml.xmlstringinput
vlt.file.xml.xmlstruct_attributename2struct
vlt.file.xml.xmlstruct_findnode
vlt.file.xml.xmlstruct_stripwhitespace
testfiles FOLDER
testfiles FOLDER
vlt.file/testfiles.testfile_freadnskip
vlt.file/testfiles.testfile_uint16_bin
fit PACKAGE
fit PACKAGE
vlt.fit.dogfit
vlt.fit.double_gauss_DoG_fit
vlt.fit.example_double_gauss_dog_data
vlt.fit.exp_fit
vlt.fit.exp_fit_err
vlt.fit.fitsearchspace
vlt.fit.gaussfit
vlt.fit.gaussfit_constraints
vlt.fit.gaussfit_conv
vlt.fit.gaussfit_err
vlt.fit.gausslogfit
vlt.fit.gaussspotfit
vlt.fit.gaussspotfit_mod
vlt.fit.gaussspotfit_nk
vlt.fit.gaussspotfit_nopos_surr
vlt.fit.gaussspotfit_noposition
vlt.fit.gaussspotfit_skew
vlt.fit.linepowerthreshold
vlt.fit.linepowerthresholdfit
vlt.fit.linethresholdfit
vlt.fit.naka_rushton
vlt.fit.naka_rushton_err
vlt.fit.naka_rushton_func
vlt.fit.naka_rushton_slope
vlt.fit.otfit_carandini
vlt.fit.otfit_carandini0
vlt.fit.otfit_carandini2
vlt.fit.otfit_carandini_conv
vlt.fit.otfit_carandini_conv0
vlt.fit.otfit_carandini_conv2
vlt.fit.otfit_carandini_err
vlt.fit.otfit_carandini_err0
vlt.fit.otfit_carandini_err2
vlt.fit.otfit_carandini_err_joint
vlt.fit.seriesresfit
vlt.fit.seriesresfit_err
vlt.fit.sin4_fit
vlt.fit.skewgaussfit_constraints
vlt.fit.tanhfit
vlt.fit.tanhfitoffset
git PACKAGE
git PACKAGE
vlt.git.git_assert
vlt.git.git_clone
vlt.git.git_install
vlt.git.git_isgitdirectory
vlt.git.git_pull
vlt.git.git_repo_version
vlt.git.git_stash
vlt.git.git_status
graph PACKAGE
graph PACKAGE
vlt.graph.dependency_graph
vlt.graph.mergegraph
html PACKAGE
html PACKAGE
vlt.html.alumni_htmltable
vlt.html.vhlab_people_html
image PACKAGE
image PACKAGE
vlt.image.circular_filter
vlt.image.doublethreshold
vlt.image.doublethresholdresegment
vlt.image.driftcheck
vlt.image.findroiinlinescan
vlt.image.image_samplepoints
vlt.image.image_samplerange
vlt.image.image_viewer_gui
vlt.image.imshift
vlt.image.inside_ellipse
vlt.image.inside_rect
vlt.image.invertcolors
vlt.image.linescan2rasterindex
vlt.image.medfilt_phase
vlt.image.mergeluts
vlt.image.neighborindexes
vlt.image.padimage
vlt.image.plotrasterroionlinescan
vlt.image.polyflare
vlt.image.prevailing_orientation
vlt.image.regionprops_circularity
vlt.image.saturation_image
vlt.image.scramblepixels_movie
vlt.image.selectsubimage
vlt.image.stack2tile
vlt.image.tiff16bit28bit
vlt.image.writetif
vlt.image.xcorr2dlag
roi PACKAGE
roi PACKAGE
vlt.image.roi.ROI_3d2dprojection
vlt.image.roi.ROI_3d_2dsummary
vlt.image.roi.ROI_3d_all_overlaps
vlt.image.roi.ROI_3d_max_xy_size
vlt.image.roi.ROI_3d_overlap
vlt.image.roi.ROI_3dplot2d
vlt.image.roi.ROI_assignneighbors
vlt.image.roi.ROI_bestcolocalization
vlt.image.roi.ROI_centerofmassdistance
vlt.image.roi.ROI_flare_indexes
vlt.image.roi.ROI_flare_indexes_buggy
vlt.image.roi.ROI_imageexample
vlt.image.roi.ROI_isolate
vlt.image.roi.ROI_resegment
vlt.image.roi.ROI_resegment_all
vlt.image.roi.ROI_subset
imseq FOLDER
imseq FOLDER
vlt.image/imseq.imseq
vlt.image/imseq.imseq_matlab
math PACKAGE
math PACKAGE
vlt.math.angdiff
vlt.math.angdiffwrap
vlt.math.angdiffwrapsign
vlt.math.angles2nsew
vlt.math.asymmetric_gaussian
vlt.math.bandwidth
vlt.math.cartesian2compass
vlt.math.cas
vlt.math.center_of_mass
vlt.math.clip
vlt.math.cluster_points_gui
vlt.math.compass2cartesian
vlt.math.complex2vector
vlt.math.cov_of_cloud
vlt.math.dangdiffwrap
vlt.math.deg2rad
vlt.math.dist2line
vlt.math.divide_nozero
vlt.math.dog
vlt.math.dog2dogf
vlt.math.dogf2dog
vlt.math.dogfull
vlt.math.double_exp
vlt.math.double_gauss_180
vlt.math.double_gauss_DoG
vlt.math.double_gauss_dog_plot
vlt.math.double_gaussian_plot
vlt.math.ellipse_on_mvnpdf
vlt.math.ellipse_on_mvnpdf_nk_x0
vlt.math.ellipse_on_mvnpdf_nopos_surr_x0
vlt.math.ellipse_on_mvnpdf_noposition_x0
vlt.math.ellipse_on_mvnpdf_x0
vlt.math.ellipse_on_mvnskewpdf
vlt.math.ellipse_on_mvnskewpdf_x0
vlt.math.eucnorm
vlt.math.floorfloor
vlt.math.fouriercoeffs
vlt.math.fouriercoeffs_2d
vlt.math.fouriercoeffs_tf
vlt.math.fouriercoeffs_tf2
vlt.math.fouriercoeffs_tf_spikes
vlt.math.gauss2d_ellipse
vlt.math.gausslog
vlt.math.generate_random_data
vlt.math.group_enumeration
vlt.math.inside
vlt.math.insideorborder
vlt.math.interval2continuous
vlt.math.interval_add
vlt.math.interval_notation
vlt.math.interval_subtract
vlt.math.intnchoosek
vlt.math.linearize_complex_discrete
vlt.math.local_max
vlt.math.magsqrt
vlt.math.meshgridarea
vlt.math.mod_ellipse_on_mvnpdf
vlt.math.mod_ellipse_on_mvnpdf_x0
vlt.math.mvnskewpdf
vlt.math.normalizebounds
vlt.math.oriented_grid
vlt.math.phase_advance
vlt.math.prctile01
vlt.math.prctile20
vlt.math.ptontoline
vlt.math.ptontovector
vlt.math.pts2line
vlt.math.rad2deg
vlt.math.rect2rect
vlt.math.rectify
vlt.math.refl2d
vlt.math.rescale
vlt.math.rescale_subrect
vlt.math.rot2d
vlt.math.rot3d
vlt.math.sample_difference_error
vlt.math.scale2d
vlt.math.single_gaussian_plot
vlt.math.skewgauss
vlt.math.slidingwindowfunc
vlt.math.slidingwindowfunc2
vlt.math.stepfunc
vlt.math.vector2mesh
identity_tests FOLDER
identity_tests FOLDER
vlt.math/identity_tests.autocorr_step_white_poles
vlt.math/identity_tests.autocorr_step_zeros
vlt.math/identity_tests.geometric_identities_tests
matlab PACKAGE
matlab PACKAGE
vlt.matlab.findfunctionusedir
vlt.matlab.findfunctionusefile
vlt.matlab.isa_text
vlt.matlab.isclassfile
vlt.matlab.isfunctionfile
vlt.matlab.matlabvers
vlt.matlab.mfile2package
vlt.matlab.mfiledirinfo
vlt.matlab.mfileinfo
vlt.matlab.packagenamereplacementtable
vlt.matlab.replacefunction
vlt.matlab.vlt_build
graphics PACKAGE
graphics PACKAGE
vlt.matlab.graphics.cubeplot3d
vlt.matlab.graphics.getline_3dplane
vlt.matlab.graphics.grect2local
vlt.matlab.graphics.isinwhere
vlt.matlab.graphics.normalized2pixels
vlt.matlab.graphics.pcolordummyrowcolumn
vlt.matlab.graphics.pixels2normalized
vlt.matlab.graphics.savefigurelist
vlt.matlab.graphics.selectpoints3d
vlt.matlab.graphics.viewpoint3dto2d
music PACKAGE
music PACKAGE
vlt.music.tone
neuro PACKAGE
neuro PACKAGE
anatomy PACKAGE
anatomy PACKAGE
vlt.neuro.anatomy.calc_cluster_index
demos PACKAGE
demos PACKAGE
vlt.neuro.demos.demo_illustrate_facespace_build
vlt.neuro.demos.nbio140_wholecell
membrane PACKAGE
membrane PACKAGE
vlt.neuro.membrane.generate_normal_vm_fr
vlt.neuro.membrane.generate_poisson_vm_fr
vlt.neuro.membrane.mle_normal_vm_fr
vlt.neuro.membrane.mle_poisson_vm_fr
vlt.neuro.membrane.normal_vm_fr
vlt.neuro.membrane.plot_voltage_firingrate_observations
vlt.neuro.membrane.poisson_vm_fr
vlt.neuro.membrane.spikeFWHM
vlt.neuro.membrane.spikekink
vlt.neuro.membrane.spikewavetrimmer
vlt.neuro.membrane.vmnospikes
vlt.neuro.membrane.voltage_firingrate_observations
vlt.neuro.membrane.voltage_firingrate_observations_per_stimulus
minis PACKAGE
minis PACKAGE
vlt.neuro.minis.minidetection
vlt.neuro.minis.minidetectionsimulation
vlt.neuro.minis.minitemplates
mledenoise PACKAGE
mledenoise PACKAGE
vlt.neuro.mledenoise.MLE_PoisGauss
vlt.neuro.mledenoise.SlowMLEDeNoise
vlt.neuro.mledenoise.gaindriftexample
vlt.neuro.mledenoise.response_gaindrift_model
vlt.neuro.mledenoise.testSlowMLE
vlt.neuro.mledenoise.testSlowMLE_modulation
archived_code FOLDER
archived_code FOLDER
vlt.neuro.mledenoise/archived_code.MLE_Gauss
vlt.neuro.mledenoise/archived_code.MLE_Pois
vlt.neuro.mledenoise/archived_code.slowdenoise
models PACKAGE
models PACKAGE
hh PACKAGE
hh PACKAGE
vlt.neuro.models.hh.HHclass
vlt.neuro.models.hh.HHsynclass
vlt.neuro.models.hh.neuronmodelclass
ode PACKAGE
ode PACKAGE
vlt.neuro.models.ode.simpleodedemo
synapses PACKAGE
synapses PACKAGE
vlt.neuro.models.synapses.depression_model_comp
vlt.neuro.models.synapses.depression_model_err
vlt.neuro.models.synapses.depression_model_fit
vlt.neuro.models.synapses.nmda_voltage_gate
vlt.neuro.models.synapses.probabilistic_release
reverse_correlation PACKAGE
reverse_correlation PACKAGE
vlt.neuro.reverse_correlation.createdirkernel
vlt.neuro.reverse_correlation.reverse_correlation_mv_stepfunc
vlt.neuro.reverse_correlation.reverse_correlation_stepfunc
vlt.neuro.reverse_correlation.reverse_correlation_stepfunc_old
vlt.neuro.reverse_correlation.simulate_1dkernel_response
vlt.neuro.reverse_correlation.sparse_noise_responses
vlt.neuro.reverse_correlation.spike_triggered_average_stepfunc
vlt.neuro.reverse_correlation.stim1d_motion
vlt.neuro.reverse_correlation.stim1d_random
demos PACKAGE
demos PACKAGE
vlt.neuro.reverse_correlation.demos.DirRFModelTestCode
vlt.neuro.reverse_correlation.demos.DirRFModel_example0
vlt.neuro.reverse_correlation.demos.DirRFModel_example1
vlt.neuro.reverse_correlation.demos.DirRFModel_example2
vlt.neuro.reverse_correlation.demos.DirRFModel_example3
vlt.neuro.reverse_correlation.demos.DirRFModel_example3_old
vlt.neuro.reverse_correlation.demos.RandomRDTestCode
hartley PACKAGE
hartley PACKAGE
vlt.neuro.reverse_correlation.hartley.build
vlt.neuro.reverse_correlation.hartley.check
vlt.neuro.reverse_correlation.hartley.draw
vlt.neuro.reverse_correlation.hartley.hartley_image
spikesorting PACKAGE
spikesorting PACKAGE
vlt.neuro.spikesorting.centerspikes_neg
vlt.neuro.spikesorting.cluster_spikewaves_gui
vlt.neuro.spikesorting.cluster_spikewaves_trivial
vlt.neuro.spikesorting.fitspike_neg
vlt.neuro.spikesorting.oversamplespikes
vlt.neuro.spikesorting.plotspikewaves
vlt.neuro.spikesorting.spikewaves2Npointfeature
vlt.neuro.spikesorting.spikewaves2pca
spiketrains PACKAGE
spiketrains PACKAGE
vlt.neuro.spiketrains.interspikeinterval
vlt.neuro.spiketrains.loglikelihood_spikerate
vlt.neuro.spiketrains.loglikelihood_spiketrain
vlt.neuro.spiketrains.make_psth
vlt.neuro.spiketrains.plot_psth
vlt.neuro.spiketrains.spikeresponse
vlt.neuro.spiketrains.spikeresponse_tf
vlt.neuro.spiketrains.spiketimes2bins
vlt.neuro.spiketrains.spiketimes_correlation
vlt.neuro.spiketrains.spiketimes_correlation_timeshiftsubtract
vlt.neuro.spiketrains.spiketimes_plot
vlt.neuro.spiketrains.spiketrain2rate
vlt.neuro.spiketrains.spiketrain_poisson_n
vlt.neuro.spiketrains.spiketrain_powerspectrum
vlt.neuro.spiketrains.spiketrain_powerspectrum_window
vlt.neuro.spiketrains.spiketrain_sinusoidal
vlt.neuro.spiketrains.spiketrain_timingcorrelated
stdp PACKAGE
stdp PACKAGE
vlt.neuro.stdp.ltpi_apply
vlt.neuro.stdp.ltpi_test
vlt.neuro.stdp.sjostrom_freq_stdp
vlt.neuro.stdp.sjostrom_spiketrain
vlt.neuro.stdp.stdp_apply
vlt.neuro.stdp.stdp_eltpi_apply
vlt.neuro.stdp.stdp_study
vlt.neuro.stdp.stdp_study_plotspiketrains
vlt.neuro.stdp.stdp_test
vlt.neuro.stdp.stdp_triplet_apply
vlt.neuro.stdp.stdp_tripletvscorrelation
vlt.neuro.stdp.stdp_tripletvsratecorrelation
stimulus PACKAGE
stimulus PACKAGE
vlt.neuro.stimulus.descramble_pseudorandom
vlt.neuro.stimulus.findcontrolstimulus
vlt.neuro.stimulus.generate_test_stimulus_responses
vlt.neuro.stimulus.plot_stimulus_timeseries
vlt.neuro.stimulus.stimids2reps
vlt.neuro.stimulus.stimulus_response_scalar
vlt.neuro.stimulus.stimulus_response_stats
vlt.neuro.stimulus.stimulus_response_summary
vlt.neuro.stimulus.trimrespcurve
vision PACKAGE
vision PACKAGE
vlt.neuro.vision.curved_monitor_view
vlt.neuro.vision.make3dbar
vlt.neuro.vision.make3dwords2
vlt.neuro.vision.simp_sat_cgain
vlt.neuro.vision.squirrelcolor
vlt.neuro.vision.stereopoint
vlt.neuro.vision.visual_stim_row_correlator
contrast PACKAGE
contrast PACKAGE
vlt.neuro.vision.contrast.naka_rushton_fit
indexes PACKAGE
indexes PACKAGE
vlt.neuro.vision.contrast.indexes.c50interpolated
vlt.neuro.vision.contrast.indexes.contrastfit2c50
vlt.neuro.vision.contrast.indexes.contrastfit2relativemaximumgain
vlt.neuro.vision.contrast.indexes.contrastfit2saturationindex
vlt.neuro.vision.contrast.indexes.contrastfit2sensitivity
vlt.neuro.vision.contrast.indexes.fitindexes
oridir PACKAGE
oridir PACKAGE
vlt.neuro.vision.oridir.dirspace2orispace
vlt.neuro.vision.oridir.doublegaussianfunc
vlt.neuro.vision.oridir.dsi2dirparams
vlt.neuro.vision.oridir.osi2oriparams
vlt.neuro.vision.oridir.osi2oriparams2
vlt.neuro.vision.oridir.rotated_oripref_stats
vlt.neuro.vision.oridir.rotatedircurve
vlt.neuro.vision.oridir.vector_direction_pref
index PACKAGE
index PACKAGE
vlt.neuro.vision.oridir.index.compute_circularvariance
vlt.neuro.vision.oridir.index.compute_dircircularvariance
vlt.neuro.vision.oridir.index.compute_directionindex
vlt.neuro.vision.oridir.index.compute_directionsignificancedotproduct
vlt.neuro.vision.oridir.index.compute_dirvecconstrainedori
vlt.neuro.vision.oridir.index.compute_dirvecdotorivec
vlt.neuro.vision.oridir.index.compute_halfwidth
vlt.neuro.vision.oridir.index.compute_orientationindex
vlt.neuro.vision.oridir.index.compute_orientationvector
vlt.neuro.vision.oridir.index.compute_tuningwidth
vlt.neuro.vision.oridir.index.fit2fitdi
vlt.neuro.vision.oridir.index.fit2fitdibr
vlt.neuro.vision.oridir.index.fit2fitdibr_orig
vlt.neuro.vision.oridir.index.fit2fitdidiffsum
vlt.neuro.vision.oridir.index.fit2fitdr_angle
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vlt.plot.quickhist
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vlt.python.conda
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vlt.signal.fermi
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vlt.signal.point2samplelabel
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vlt.signal.remove60hz
vlt.signal.removespikes
vlt.signal.round2sample
vlt.signal.sample2value
vlt.signal.samplesinepochs
vlt.signal.step_autocorrelation
vlt.signal.step_autocorrelation_ztrans_discrete
vlt.signal.step_whitening_filter
vlt.signal.threshold_crossings
vlt.signal.threshold_crossings_epochs
vlt.signal.value2sample
vlt.signal.whitening_filter_from_autocorr
vlt.signal.wiener_demo
vlt.signal.xcorr_discrete
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spreadsheet PACKAGE
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stats PACKAGE
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vlt.stats.hartigansdipsigniftest
vlt.stats.hartigansdiptest
vlt.stats.hist_percentile
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vlt.stats.hotellingt2test
vlt.stats.kolmogorov_smirnov_cdf
vlt.stats.kolmogorov_smirnov_test
vlt.stats.kruskal_wallis_mv
vlt.stats.kruskal_wallis_test
vlt.stats.ks2_cdf
vlt.stats.ks_cdf_conf
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vlt.stats.lm_category
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vlt.stats.mwustat
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vlt.stats.myanova1
vlt.stats.nested_f
vlt.stats.nestedftest
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vlt.stats.quickregression
vlt.stats.quickregressionpvalue
vlt.stats.ranks
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vlt.stats.std_from_median
vlt.stats.stderr
vlt.stats.twocurves_bhfdr
string PACKAGE
string PACKAGE
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vlt.string.bracematch
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time PACKAGE
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vlt.time.dowait
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ui PACKAGE
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vlt.ui.findclosestpointclick
vlt.ui.genercallback
vlt.ui.lb_getselected
vlt.ui.myuiinit
vlt.ui.nitemmenuselection
vlt.ui.settoolbar
vlt.ui.simplepopupmenucallback
vlt.ui.textbox
vlt.ui.uigetvarname
batch FOLDER
batch FOLDER
simple_batch
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colorspace FOLDER
angle2ybgr
angle2ycgr
cmyk2rgb
rgb2cmyk
config FOLDER
config FOLDER
add_config_file
config_dirname
daq FOLDER
daq FOLDER
MCCUSB1208FS FOLDER
MCCUSB1208FS FOLDER
MCCUSB1208FS_AcquireSimpleDaq
MCCUSB1208FS_CloseSimpleDaq
MCCUSB1208FS_OpenSimpleDaq
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dummyekgeegdaq FOLDER
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dummyekgeegdaq_OpenSimpleDaq
simpledaq FOLDER
simpledaq FOLDER
AcquireSimpleDaq
CloseSimpleDaq
NewSimpleDaq
OpenSimpleDaq
datastructures FOLDER
datastructures FOLDER
assign
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cell2group
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conditional
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deleteallchildren
dropnan
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cell FOLDER
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single FOLDER
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struct FOLDER
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linpath2mac
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loadStructArray
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reference_txt
release_lock_file
rename_mfiles_functions
saveStructArray
saveasv73
searchreplacefiles_shell
str2text
string2filestring
text2cellnum
text2cellstr
textfile2char
vcard2mat
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dirstruct FOLDER
dirstruct FOLDER
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notyetconverted FOLDER
notyetconverted FOLDER
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setextractortype
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private FOLDER
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namerefind
typefind
custom_file_formats FOLDER
custom_file_formats FOLDER
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addvhlspikewaveformfile
convertvhlvdatafile2integer
newroirawdatafile
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vhsb_read
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testfiles FOLDER
testfiles FOLDER
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testfile_uint16_bin
thirdparty_file_formats FOLDER
thirdparty_file_formats FOLDER
bioformats2xml
CED-SOM_SMR FOLDER
CED-SOM_SMR FOLDER
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Intan-RHD2000 FOLDER
Intan-RHD2000 FOLDER
Intan_RHD2000_blockinfo
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read_Intan_RHD2000_datafile
read_Intan_RHD2000_directory
read_Intan_RHD2000_header
Intan-RHD2000old FOLDER
Intan-RHD2000old FOLDER
Intan_RHD2000_blockinfoold
read_Intan_RHD2000_datafileold
read_Intan_RHD2000_headerold
LeafLabs-Willow FOLDER
LeafLabs-Willow FOLDER
read_Willow_datafile
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SpikeGadgets-REC FOLDER
SpikeGadgets-REC FOLDER
copy_SpikeGadgets_rec_files
read_SpikeGadgets_analogChannels
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read_SpikeGadgets_digitalChannels
read_SpikeGadgets_trodeChannels
xml FOLDER
xml FOLDER
getXMLNodeText
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xml2struct_vhtools
xmlstringinput
xmlstruct_attributename2struct
xmlstruct_findnode
xmlstruct_stripwhitespace
fits FOLDER
fits FOLDER
double_gauss_DoG_fit
example_double_gauss_dog_data
exp_fit
exp_fit_err
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gaussfit
gaussfit_conv
gaussfit_err
gaussspotfit
gaussspotfit_mod
gaussspotfit_nk
gaussspotfit_nopos_surr
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linepowerthreshold
linepowerthresholdfit
linethresholdfit
naka_rushton
naka_rushton_err
naka_rushton_func
naka_rushton_slope
otfit_carandini
otfit_carandini0
otfit_carandini2
otfit_carandini_conv
otfit_carandini_conv0
otfit_carandini_conv2
otfit_carandini_err
otfit_carandini_err0
otfit_carandini_err2
otfit_carandini_err_joint
seriesresfit
seriesresfit_err
sin4_fit
tanhfit
tanhfitoffset
git FOLDER
git FOLDER
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git_pull
git_repo_version
git_status
graph FOLDER
graph FOLDER
dependency_graph
mergegraph
html FOLDER
html FOLDER
alumni_htmltable
vhlab_people_html
image FOLDER
image FOLDER
driftcheck
findroiinlinescan
image_samplepoints
image_samplerange
image_viewer_gui
imshift
inside_ellipse
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medfilt_phase
mergeluts
neighborindexes
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polyflare
regionprops_circularity
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scramblepixels_movie
tiff16bit28bit
xcorr2dlag
ROIs FOLDER
ROIs FOLDER
ROI_3d2dprojection
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ROI_3dplot2d
ROI_assignneighbors
ROI_centerofmassdistance
ROI_flare_indexes
ROI_flare_indexes_buggy
ROI_imageexample
ROI_isolate
ROI_resegment
ROI_resegment_all
ROI_subset
imseq FOLDER
imseq FOLDER
imseq
imseq_matlab
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math FOLDER
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cas
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clip
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complex2vector
cov_of_cloud
dangdiffwrap
deg2rad
dist2line
divide_nozero
double_exp
double_gauss_180
double_gauss_DoG
double_gauss_dog_plot
double_gaussian_plot
ellipse_on_mvnpdf
ellipse_on_mvnpdf_nk_x0
ellipse_on_mvnpdf_nopos_surr_x0
ellipse_on_mvnpdf_noposition_x0
ellipse_on_mvnpdf_x0
ellipse_on_mvnskewpdf
ellipse_on_mvnskewpdf_x0
eucnorm
floorfloor
fouriercoeffs
fouriercoeffs_2d
fouriercoeffs_tf
fouriercoeffs_tf2
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gauss2d_ellipse
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interval_add
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intnchoosek
linearize_complex_discrete
local_max
magsqrt
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mod_ellipse_on_mvnpdf
mod_ellipse_on_mvnpdf_x0
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rot3d
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single_gaussian_plot
slidingwindowfunc
slidingwindowfunc2
stepfunc
identity_tests FOLDER
identity_tests FOLDER
autocorr_step_white_poles
autocorr_step_zeros
geometric_identities_tests
matlab FOLDER
matlab FOLDER
isa_text
matlabvers
matlab_graphics FOLDER
matlab_graphics FOLDER
cubeplot3d
getline_3dplane
grect2local
isinwhere
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pcolordummyrowcolumn
pixels2normalized
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selectpoints3d
viewpoint3dto2d
neuroscience FOLDER
neuroscience FOLDER
anatomy FOLDER
anatomy FOLDER
calc_cluster_index
demos FOLDER
demos FOLDER
demo_illustrate_facespace_build
nbio140_wholecell
membrane_voltage FOLDER
membrane_voltage FOLDER
generate_normal_vm_fr
generate_poisson_vm_fr
mle_normal_vm_fr
mle_poisson_vm_fr
normal_vm_fr
plot_voltage_firingrate_observations
poisson_vm_fr
spikeFWHM
spikekink
spikewavetrimmer
vmnospikes
voltage_firingrate_observations
voltage_firingrate_observations_per_stimulus
minis FOLDER
minis FOLDER
minidetection
minidetectionsimulation
minitemplates
mledenoise FOLDER
mledenoise FOLDER
MLE_PoisGauss
SlowMLEDeNoise
gaindriftexample
response_gaindrift_model
testSlowMLE
testSlowMLE_modulation
archived_code FOLDER
archived_code FOLDER
MLE_Gauss
MLE_Pois
slowdenoise
models FOLDER
models FOLDER
hh FOLDER
hh FOLDER
HHclass
HHsynclass
neuronmodelclass
modelel FOLDER
modelel FOLDER
modelel FOLDER
modelel FOLDER
modelel_init
modelel_reset
modeleldemo FOLDER
modeleldemo FOLDER
directionselectivity4cell_learning1
directionselectivity4cell_random
directionselectivity4celldemo
directionselectivityNcell_GsynAP
directionselectivityNcell_learning1
directionselectivityNcell_learning2
directionselectivityNcell_learning_thresh
directionselectivityNcell_random
directionselectivityNcelldemo
directionselectivityNcelldemo_inhib
directionselectivityNcelldemo_inhib_orig
directionselectivityNcelldemo_thresh
intfireleaky_GsynAP
intfireleaky_Gsyn_vs_F
intfireleaky_SynMemTau
intfireleaky_currentdemo
intfireleaky_synapsedemo
plotdirectionselectivity4cell
plotdirectionselectivity4cell_thresh
synapseel_stdpdemo
modelelrun FOLDER
modelelrun FOLDER
modelel_convertforc
modelel_convertfromc
modelel_importvariables
modelel_runvarname2log
modelelrun
modelelrun_executable
neuronmodelel FOLDER
neuronmodelel FOLDER
isspiking
neuronmodelel
intfiremodels FOLDER
intfiremodels FOLDER
intfireleakyel_init
intfireleakyel_step
spiketimelistel FOLDER
spiketimelistel FOLDER
spiketimelistel_init
spiketimelistel_step
synapseel FOLDER
synapseel FOLDER
modelelgetsyn
modelelsynconn
plasticity_methods FOLDER
plasticity_methods FOLDER
synapseel_stdp
synapset1t2el FOLDER
synapset1t2el FOLDER
synapset1t2el_init
synapset1t2el_step
ode FOLDER
ode FOLDER
simpleodedemo
synapses FOLDER
synapses FOLDER
depression_model_comp
depression_model_err
depression_model_fit
nmda_voltage_gate
probabilistic_release
reverse_correlation FOLDER
reverse_correlation FOLDER
createdirkernel
reverse_correlation_mv_stepfunc
reverse_correlation_stepfunc
reverse_correlation_stepfunc_old
simulate_1dkernel_response
spike_triggered_average_stepfunc
stim1d_motion
stim1d_random
demos FOLDER
demos FOLDER
DirRFModelTestCode
DirRFModel_example0
DirRFModel_example1
DirRFModel_example2
DirRFModel_example3
DirRFModel_example3_old
RandomRDTestCode
hartley FOLDER
hartley FOLDER
hartley_image
spikesorting FOLDER
spikesorting FOLDER
centerspikes_neg
cluster_spikewaves_gui
cluster_spikewaves_trivial
fitspike_neg
oversamplespikes
plotspikewaves
spikewaves2Npointfeature
spikewaves2pca
spiketrains FOLDER
spiketrains FOLDER
interspikeinterval
loglikelihood_spikerate
loglikelihood_spiketrain
make_psth
plot_psth
spikeresponse
spikeresponse_tf
spiketimes2bins
spiketimes_correlation
spiketimes_correlation_timeshiftsubtract
spiketimes_plot
spiketrain2rate
spiketrain_poisson_n
spiketrain_powerspectrum
spiketrain_powerspectrum_window
spiketrain_sinusoidal
spiketrain_timingcorrelated
stdp FOLDER
stdp FOLDER
ltpi_apply
ltpi_test
sjostrom_freq_stdp
sjostrom_spiketrain
stdp_apply
stdp_eltpi_apply
stdp_study
stdp_study_plotspiketrains
stdp_test
stdp_triplet_apply
stdp_tripletvscorrelation
stdp_tripletvsratecorrelation
stimulus_analysis FOLDER
stimulus_analysis FOLDER
descramble_pseudorandom
findcontrolstimulus
generate_test_stimulus_responses
plot_stimulus_timeseries
stimids2reps
stimulus_response_scalar
stimulus_response_stats
stimulus_response_summary
trimrespcurve
vision FOLDER
vision FOLDER
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make3dbar
make3dwords2
simp_sat_cgain
squirrelcolor
stereopoint
visual_stim_row_correlator
contrast FOLDER
contrast FOLDER
indexes FOLDER
indexes FOLDER
contrastfit2c50
contrastfit2relativemaximumgain
contrastfit2saturationindex
oridir FOLDER
oridir FOLDER
dirspace2orispace
dsi2dirparams
osi2oriparams
osi2oriparams2
rotated_oripref_stats
rotatedircurve
vector_direction_pref
indexes FOLDER
indexes FOLDER
compute_circularvariance
compute_dircircularvariance
compute_directionindex
compute_directionsignificancedotproduct
compute_dirvecconstrainedori
compute_dirvecdotorivec
compute_halfwidth
compute_orientationindex
compute_orientationvector
compute_tuningwidth
fit2fitdi
fit2fitdibr
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fit2fitdr_angle
fit2fitoi
fit2fitoidiffsum
fit2null
fit2orth
fit2pref
oridir_fitindexes
oridir_vectorindexes
plotting FOLDER
plotting FOLDER
polarplot_dir
polarplot_ori
not_packaged FOLDER
not_packaged FOLDER
archived_code FOLDER
archived_code FOLDER
modelel FOLDER
modelel FOLDER
modelel FOLDER
modelel FOLDER
modelel_init
modelel_reset
modeleldemo FOLDER
modeleldemo FOLDER
directionselectivity4cell_learning1
directionselectivity4cell_random
directionselectivity4celldemo
directionselectivityNcell_GsynAP
directionselectivityNcell_learning1
directionselectivityNcell_learning2
directionselectivityNcell_learning_thresh
directionselectivityNcell_random
directionselectivityNcelldemo
directionselectivityNcelldemo_inhib
directionselectivityNcelldemo_inhib_orig
directionselectivityNcelldemo_thresh
intfireleaky_GsynAP
intfireleaky_Gsyn_vs_F
intfireleaky_SynMemTau
intfireleaky_currentdemo
intfireleaky_synapsedemo
plotdirectionselectivity4cell
plotdirectionselectivity4cell_thresh
synapseel_stdpdemo
modelelrun FOLDER
modelelrun FOLDER
modelel_convertforc
modelel_convertfromc
modelel_importvariables
modelel_runvarname2log
modelelrun
modelelrun_executable
neuronmodelel FOLDER
neuronmodelel FOLDER
isspiking
neuronmodelel
intfiremodels FOLDER
intfiremodels FOLDER
intfireleakyel_init
intfireleakyel_step
spiketimelistel FOLDER
spiketimelistel FOLDER
spiketimelistel_init
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synapseel FOLDER
modelelgetsyn
modelelsynconn
plasticity_methods FOLDER
plasticity_methods FOLDER
synapseel_stdp
synapset1t2el FOLDER
synapset1t2el FOLDER
synapset1t2el_init
synapset1t2el_step
office FOLDER
office FOLDER
addresslabels2pdf
vcarddata2addresslabels
optics FOLDER
optics FOLDER
ideal_optical_transfer_function
optics_tables FOLDER
optics_tables FOLDER
luminous_efficacy
optics_table
paths FOLDER
paths FOLDER
pathstr2cellarray
pcb FOLDER
pcb FOLDER
KiCadGerber2OSHPark
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plotting FOLDER
arrowplot
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autoplacetext
cleanfig
colorlist
ctable
cumhist
drawbarinimage
drawshape
hist2d
hist2line
imagedisplay
intline
matchaxes
median_within_between_plot
movetoback
movetofront
myerrorbar
plot_multichan
plotbargraphwithdata
plotmeanbar
plotoribox
plotshade
posterize
quickhist
scatterplot
shiftedbar
supersubplot
signal FOLDER
signal FOLDER
correlation_stepfunc
data2intervals
decompose_time
detrend_median
dotdisc
dual_led_filters
fermi
filterwaveform
oversample
point2samplelabel
refractory
remove60hz
removespikes
round2sample
samplesinepochs
step_autocorrelation
step_autocorrelation_ztrans_discrete
step_whitening_filter
threshold_crossings
threshold_crossings_epochs
whitening_filter_from_autocorr
wiener_demo
xcorr_discrete
xcorr_stepfunc
xcorr_stepfuncstepfunc
ztrans_discrete
spreadsheet FOLDER
spreadsheet FOLDER
spreadsheet_filterbydate
spreadsheet_multiplechoice
stats FOLDER
stats FOLDER
chi2class
chi2uniformtest
discrimin_iterative
discrimin_iterative_err
gof_Zoccolan
gof_dicarlo_totalpower
gof_dicarlo_totalpower_biastest
gof_totalpower
hartigansdipsigniftest
hartigansdiptest
hist_percentile
hist_std
hotellingt2test
kolmogorov_smirnov_cdf
kolmogorov_smirnov_test
kruskal_wallis_mv
kruskal_wallis_test
ks2_cdf
ks_cdf_conf
ks_cdf_conf_plot
manova
mwustat
myanova
myanova1
nested_f
nestedftest
power_index
pseudorandomorder
quickregression
quickregressionpvalue
ranks
ranks2
resample_responses
roc_analysis
std_from_median
stderr
twocurves_bhfdr
string FOLDER
string FOLDER
bracelevel
bracematch
intseq2str
ismatlabstring
line_n
str2intseq
strcmp_substitution
trimsymbol
trimws
version_decode
time FOLDER
time FOLDER
datevecdiff
dowait
fulltimestamp2datevec
user_interface FOLDER
user_interface FOLDER
basicuitools_defs
callbacknametag
checksyntaxsize
dlg2struct
figurecommandcallbackstr
findclosestpointclick
genercallback
lb_getselected
myuiinit
nitemmenuselection
settoolbar
simplepopupmenucallback
textbox
uigetvarname
grect2local
¶
Normalize a rectangle in units of a local rectangle